Fix download by not using processx
This commit is contained in:
56
app.R
56
app.R
@@ -621,13 +621,51 @@ server <- function(input, output, session) {
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})
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})
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export <- function(model, fPath) {
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exportOrca <- function (p, file = "plot.png", format = tools::file_ext(file),
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scale = NULL, width = NULL, height = NULL,
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verbose = FALSE, debug = FALSE, safe = FALSE)
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{
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if (Sys.which("orca") == "") {
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stop("The orca command-line utility is required to use the `orca()` function.\n\n",
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"Follow the installation instructions here -- https://github.com/plotly/orca#installation",
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call. = FALSE)
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}
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return(zipFile)
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b <- plotly_build(p)
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plotlyjs <- b$dependencies[sapply(b$dependencies, function(d) { d$name == "plotly-main" })][[1]]
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plotlyjs_file <- file.path(plotlyjs$src$file, plotlyjs$script)
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args <- c(
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"graph", shQuote(jsonlite::toJSON(
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b$x[c("data", "layout")],
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digits = 50,
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auto_unbox = TRUE,
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force = TRUE,
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null = "null",
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na = "null"
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)),
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"-o", file,
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"--format", format,
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"--plotlyjs", plotlyjs_file
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)
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if (debug)
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args <- c(args, "--debug")
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if (verbose)
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args <- c(args, "--verbose")
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if (safe)
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args <- c(args, "--safe-mode")
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if (!is.null(scale))
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args <- c(args, "--scale", scale)
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if (!is.null(width))
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args <- c(args, "--width", width)
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if (!is.null(height))
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args <- c(args, "--height", height)
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invisible(system2("orca", args))
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}
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}
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output$linkBackgroundData <- downloadHandler(
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output$linkBackgroundData <- downloadHandler(
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filename = getModelName(),
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filename = getModelName(),
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content = function(file) {
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content = function(file) {
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@@ -637,7 +675,7 @@ server <- function(input, output, session) {
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)
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)
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output$download <- downloadHandler(
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output$download <- downloadHandler(
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filename = function() {paste0("MESO-", format(Sys.time(), "%m%d_%H%M"), ".zip")},
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filename = function() { paste0("MESO-", format(Sys.time(), "%m%d_%H%M"), ".zip") },
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content = function(file) {
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content = function(file) {
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showModal(
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showModal(
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modalDialog(
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modalDialog(
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@@ -651,17 +689,13 @@ server <- function(input, output, session) {
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oldDir <- getwd()
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oldDir <- getwd()
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tmp <- tempfile("")
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tmp <- tempfile("")
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print(tmp)
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dir.create(tmp)
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dir.create(tmp)
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setwd(tmp)
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setwd(tmp)
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#Get the network graph
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#Get the network graph
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l1 <- orca(prepPlot("ba", "Bio-Assemblage"), "layer1.png")
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l1 <- exportOrca(prepPlot("ba", "Bio-Assemblage"), "layer1.png")
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l2 <- orca(prepPlot("op", "Output Processes"),"layer2.png")
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l2 <- exportOrca(prepPlot("op", "Output Processes"),"layer2.png")
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l3 <- orca(prepPlot("es", "Ecosystem Services"),"layer3.png")
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l3 <- exportOrca(prepPlot("es", "Ecosystem Services"),"layer3.png")
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#Save pressure list, confidence levels, node and edge tables in xlsx
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#Save pressure list, confidence levels, node and edge tables in xlsx
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l <- list(
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l <- list(
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